mrna-lncrna-combined microarray (CapitalBio Corporation)
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Figure S1 . " width="250" height="auto" />Mrna Lncrna Combined Microarray, supplied by CapitalBio Corporation, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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1) Product Images from "Long Noncoding RNA ADINR Regulates Adipogenesis by Transcriptionally Activating C/EBPα"
Article Title: Long Noncoding RNA ADINR Regulates Adipogenesis by Transcriptionally Activating C/EBPα
Journal: Stem Cell Reports
doi: 10.1016/j.stemcr.2015.09.007
Figure S1 . " title="... 0, 3, and 6 of adipogenic differentiation. The microarray data are from three independent biological replicates. NC, ..." property="contentUrl" width="100%" height="100%"/>
Figure Legend Snippet: lncRNA ADINR Is Upregulated during Adipogenic Differentiation (A) Mean-centered, hierarchical clustering of 1,423 differentially (≥2-fold) expressed (two-tailed, paired Student’s t test, FDR < 0.2), previously annotated noncoding RNAs on days 0, 3, and 6 of adipogenic differentiation. The microarray data are from three independent biological replicates. NC, negative control. (B) ChIP-seq analysis of H3K4me3 and H3K27me3 at the C/EBPα and ADINR loci in adipose-derived hMSCs on day 20 of adipogenic differentiation relative to the undifferentiated cells (day 0). The data were obtained from the Roadmap Epigenomics Project. (C) qRT-PCR analysis of C/EBPα and ADINR expression across three time points (days 0, 3, and 6) of adipogenic differentiation. The relative expression levels after normalizing to the amount of GAPDH signal in each sample are shown. qPCR data are presented as the mean ± SD in three independent experiments. (D) 5′ and 3′ RACE and RT-PCR assays detecting full-length ADINR RNA in undifferentiated (0d) and 3-day adipogenic-differentiated (3d) hMSCs. The longest bands (arrows) for ADINR RNA in the RACE assays were indicated. Through sequencing the PCR product of 5′ RACE, we found that the two shorter bands are non-specific PCR products. +, RT-PCR using DNase-treated 3d total RNA; -, PCR using DNase-treated 3d total RNA (no RT; negative control). (E) Single-molecule RNA fluorescence in situ hybridization shows greatly increased abundance of ADINR molecules during adipogenic differentiation, and ADINR RNA is exclusively localized in the nucleus of hMSCs and day-3 differentiated cells. Scale bars, 50 μm. See also
Techniques Used: Two Tailed Test, Microarray, Negative Control, ChIP-sequencing, Derivative Assay, Quantitative RT-PCR, Expressing, Reverse Transcription Polymerase Chain Reaction, Sequencing, Fluorescence, In Situ Hybridization